| Alternate Ending |
| 1. Supremancy Dossier PIP |
| 10. Anatomy of a Scene: The Explosive Bridge Chase Scene |
| 11. Scoring with John Powell |
| 12. The Bourne Mastermind |
| 2. Explosive Deleted Scenes |
| 3. Matching Identities: Casting |
| 4. Keeping it Real |
| 5. Blowing Things Up |
| 6. On the Move with Jason Bourne |
| 7. Bourne to be Wild: Fight Training |
| 8. Crash Cam: Racing Through the Streets of Moscow |
| 9. The Go-Mobile Revs Up the Action |
| Interviews: Access Granted: An Interview with Screenwriter Tony Gilroy |
| Alternate Opening |
| BD Live: Ultimate Bourne Card Battle Strategy Game |
| BD Live: Ultimate Download Center |
| BD Live: Ultimate My Bourne Supremacy Commentary |
| BD Live: Ultimate My Chat |
| BD Live: Ultimate My Scenes Sharing |
| Disc 1: (Side A) THE BOURNE IDENTITY |
| Extended Farmhouse Scene |
| Music Video: Moby "Extreme Ways" Music Video |
| My Scenes |
| Playstation 3 Controller (static user guide) |
| The Bourne Diagnosis |
| U Control: Bourne Orientation |
| U Control: Picture in Picture |
| U Control: Treadstone Files |
| Audio Commentary:
| 1. Doug Liman | | 2. Director Paul Greengrass | | Featurette:
| 1. The Ludlum Identity | | 2. The Ludlum Supremacy | | 3. The Ludlum Ultimatum | | 4. The Bourne Mastermind: Robert Ludlum | | 5. The Birth of The Bourne Identity | | 6. From Identity to Supremacy: Jason & Marie | | 7. The Bourne Diagnosis | | 8. Cloak and Daggar: Covert OPs | | 9. Inside a Fight Sequence | | 10. Supremancy Dossier PIP | | 11. Matching Identities: Casting | | 12. Keeping it Real | | 13. Blowing Things Up | | 14. On the Move with Jason Bourne | | 15. Bourne to be Wild: Fight Training | | 16. Crash Cam: Racing Through the Streets of Moscow | | 17. The Go-Mobile Revs Up the Action | | 18. Anatomy of a Scene: The Explosive Bridge Chase Scene | | 19. Scoring with John Powel | | 20. The Bourne Mastermind | | 21. The Bourne Diagnosis | | Interactive Features:
| BD Live: Bourne Card Battle Strategy Game | | BD Live: Download Center | | BD Live: My Chat | | BD Live: My Scenes Sharing | | BD Live: The Bourne Identity Commentary | | BD Live: Ultimate My Bourne Supremacy Commentary | | Disc 2: (Side A) THE BOURNE ULTIMATUM |
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